Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927184.1_cds_XP_016475077.1_67041
CDS Infomation

[gene=LOC107796782] [db_xref=GeneID:107796782] [protein=3-phosphoshikimate 1-carboxyvinyltransferase 1, chloroplastic-like] [protein_id=XP_016475077.1] [location=complement(join(10649..10867,11001..11062,12068..12278,12492..12609,12692..12906,13909..14062,14370..14611,15579..15911))] [gbkey=CDS]
Sequence

ATGGCACAGATTAGCAGCATGGGGCAAGTGAAACAGACCCCTAATCTTAATTCCTATCTT
CCTAAAAACCAAAAGGGTCTTCTTTTTTCACATTCGCTCTTCTTCGGATCAAAGAAAATA
AACCACAATTCAGCAAAATCTTTGTGGGTGTGTAAGAAAGATTCAGTTTTGAGGGTGGCA
AAGTCACCTTTTAGGATTTCTGCATCAGTGGCCACTGCACAGAAGCCCAACGAGATTGTG
CTGCAACCCATCAAAGATATATCAGGCACTGTTAAATTGCCTGGTTCTAAATCCCTTTCC
AATCGTATTCTCCTTCTTGCTGCCCTTTCTGAGGGAAGGACTGTTGTTGACAATTTACTG
AGTAGTGATGACATTCATTACATGCTTGGTGCATTGAAAACACTTGGACTTTATGTAGAA
GATGACAATGGAAACCAACGAGCAATTGTGGAAGGTTGTGGTGGGCAGTTTCCCGTTGGC
AAAAATTCTGAGCAAGAAATCCAACTGTTCCTTGGAAATGCAGGAACAGCAATGCGACCA
TTGACAGCAGCAGTTACTGTAGNGGGAGGAGGTTTATATGTACTTGATGGAGTTCCTAGG
ATGAGAGAGAGACCGATTGGTGATTTGGTTGATGGTCTTAAGCAGCTTGGTGCAGAGGTT
GATTGTTTCCTTGGTACGAATTGTCCCCCAGTTCGTATAGTCAGCAAGGGAGGTCTTCCA
GGAGGGAAGGTAAAGCTCTCTGGATCTATTAGCAGCCAATACCTGACTGCTCTGCTGATG
GCTGCTCCACTGGCTCTAGGGGATGTGGAGATTGAAATAATTGACAAACTAATTTCTGTA
CCTTATGTTGAAATGACACTGAAGTTGATGGAGCGATTTGGTGTCTCTGTGGAGCACACT
AGTAGCTGGGATAGATTCTTGGTTCGAGGAGGTCAGAAGTACAAGTCTCCTGGAAAAGCA
TATGTTGAAGGAGATGCCTCAAGTGCTAGTTACTTTTTGGCCGGTGCAGCTGTCACGGGT
GGAACTGTCACCGTTGAAGGTTGTGGAACAAGCAGTTTACAGGGGGATGTTAAGTTTGCT
GAGGTCCTCGAGAAGATGGGAGCAGAAGTTACATGGACAGAGAACAGTGTCACAGTTAAA
GGACCTCCAAGGAACTCTTCTGGAATGAAACTCTTGCGTGCCATTGACGTGAACATGAAC
AAAATGCCAGATGTTGCCATGACTCTTGCTGTAGTTGCACTTTTTGCTGATGGTCCTACT
GCCATAAGAGATGTTGCCAGTTGGAGAGTTAAGGAAACTGAGCGGATGATTGCCATATGC
ACAGAACTTAGGAAGTTAGGTGCAACAGTTGTAGAAGGGCCAGACTACTGCATAATCACC
CCACCTGAAAAGTTAAACGTAACGGAAATTGATACATATGATGATCATAGAATGGCCATG
GCTTTCTCTCTTGCTGCTTGTGCTGATGTTCCAGTCACCATTAAGGACCCCGGTTGTACT
CGCAAAACCTTCCCCAACTACTTTGACGTTCTCCAGCAGTACTCCAAGCATTAA

Peptide Sequence

PEP ID

XP_016475077.1
PEP Infomation

PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransferase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MAQISSMGQVKQTPNLNSYLPKNQKGLLFSHSLFFGSKKINHNSAKSLWVCKKDSVLRVA
KSPFRISASVATAQKPNEIVLQPIKDISGTVKLPGSKSLSNRILLLAALSEGRTVVDNLL
SSDDIHYMLGALKTLGLYVEDDNGNQRAIVEGCGGQFPVGKNSEQEIQLFLGNAGTAMRP
LTAAVTVXGGGLYVLDGVPRMRERPIGDLVDGLKQLGAEVDCFLGTNCPPVRIVSKGGLP
GGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGVSVEHT
SSWDRFLVRGGQKYKSPGKAYVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQGDVKFA
EVLEKMGAEVTWTENSVTVKGPPRNSSGMKLLRAIDVNMNKMPDVAMTLAVVALFADGPT
AIRDVASWRVKETERMIAICTELRKLGATVVEGPDYCIITPPEKLNVTEIDTYDDHRMAM
AFSLAACADVPVTIKDPGCTRKTFPNYFDVLQQYSKH

Transcript Sequence

Gene sequence data has not been registered.